NEUR 734 / CSI 734
COMPUTATIONAL NEUROBIOLOGY
Dr. Kim L. Blackwell
Spring, 2006
Wednesday, 12 - 2:50 PM
Krasnow Lecture Hall
COURSE DESCRIPTION
An intense review of neurobiology for graduate students interested in studying how nerve cells integrate and transmit signals, and how behavior emerges from the integrated actions of populations or circuits of nerve cells. The course covers electrical and biochemical properties of single neurons, and electrical and chemical communication between neurons. Emphasis is on mathematical descriptions and computational techniques used to study and understand neurons and networks of neurons.Learn how to ask and answer questions about neurobiology using computational techniques
GRADING
Homework
Assigned almost every week.
Due the following class period
10% of grade
Homework turned in one week late will be graded, but marked down one letter grade
Homework not accepted more than one week late
Exams
Midterm counts 45% of grade
Final counts 45% of grade, is NOT cummulative
No re-tests
SYLLABUS
WEEK/DATE |
TOPIC |
READING |
1 |
Introduction, Electrical Circuit Theory, Equilibrium Lecture in ppt |
J&W appendix , Chap 2,3 |
2 |
Computer Lab - ionic concentrations (12 - 1:20) |
J&W 4, Rall chapter |
3 |
Neurons as conductors of electricity |
|
4 |
Computer Lab - Cable (12-1:20) |
|
5 |
Ionic Basis of Action Potential |
J&W Chap 5,6 |
6 |
Computer Labs - Squid (12-1:20) |
BoG Chap 4 |
7 |
Computer Labs - burster (12-1:20) |
|
8 |
MIDTERM (Lectures 1-6) |
|
9 |
Single channel Analysis |
J&W Chap 8,9,10 |
10 |
Single Channel Analysis |
J&W Chap 8,9,10 |
11 |
Pre-synaptic transmission |
J&W Chap 11 |
12 |
Post-synaptic transmission, GAP junctions |
J&W Chap 12, 13 |
13 |
Synaptic plasticity |
J&W Chap 15 |
15 |
Review |
|
5/10 |
FINAL, 12 Noon - 2:50 PM (Lectures 8-14) |
|
TEXT
1.Johnston and Wu, Foundations of Cellular Neurophysiology, MIT Press, 1995
2. Bower and Beeman, The Book of GENESIS, Telos, 2nd Edition
SOFTWARE TOOLS