Krasnow Institute

Publications by Krasnow Faculty

 

2008

Hemond P., Epstein D., Migliore M., Ascoli G., Jaffe D.: Distinct classes of pyramidal cells exhibit mutually exclusive firing patterns in hippocampal area CA3b. Hippocampus. 18:411-24 (2008).

Scorcioni R., Polavaram S., Ascoli G.: L-Measure: a web-accessible tool for the analysis, comparison and search of digital reconstructions of neuronal morphologies. Nature Prot. 3:866-76 (2008).

Donohue D., Ascoli G.: A comparative computer simulation of dendritic morphology. PLoS Comput. Biol. 4(5): e1000089 (2008).

Li X., Ascoli G.: Effects of synaptic synchrony on the neuronal input/output relationship. Neural Computation. 20:1717-31 (2008).

Ascoli G., Alonso L., Anderson S., Barrionuevo G., Benavides-Piccione R., Burkhalter A., Buzsaki G., Cauli B., DeFelipe J., Fairén A., Feldmeyer D., Fishell G., Fregnac Y., Freund T.F., Karube F., Gardner D., Gardner E., Goldberg J., Helmstaedter M., Hestrin S., Kisvarday Z., Lambolez B., Lewis D., Marin O., Markram H., Muñoz A., Packer A., Petersen C., Rockland K., Rossier J., Rudy B., Somogyi P., Staiger J.F., Tamas G., Thomson A., Toledo M., Wang Y., West D., Yuste R.: Petilla Terminology:  Nomenclature of features of GABAergic interneurons of the cerebral cortex. Nature Rev. Neurosci. 9:557-68 (2008).

Ferrante M., Blackwell K., Migliore M., Ascoli G.: Computational models of neuronal biophysics and the characterization of potential neuropharmacological targets. Curr. Med. Chem. 15:2456-71(2008).

Scorcioni R., Hamilton D., Ascoli G.: Self-sustaining non-repetitive activity in a large scale neuronal-level model of the hippocampal circuit. Neural Netw., 21:1153-63(2008).

Brown K., Gillette T., Ascoli G.: Quantifying neuronal size: Summing up trees and splitting the branch difference. Sem. Cell Dev. Biol., 19:485-93 (2008).

Gardner D., Akil H., Ascoli G., Bowden D., Bug W., Donohue D, Goldberg D., Grafstein B., Grethe J., Gupta A., Halavi M., Kennedy D., Marenco L., Martone M., Miller P., Müller H.-M., Robert A., Shepherd G., Sternberg P., Van Essen D., Williams R.: The Neuroscience Information Framework: a data and knowledge environment for neuroscience. Neuroinformatics, 6:149-60 (2008).

Marenco L., Ascoli G., Martone M., Shepherd G., Miller P.: The pilot NIF LinkOut broker: A web resource to facilitate federated data integration using NCBI identifiers. Neuroinformatics, 6:219-27 (2008).

Bug W., Ascoli G., Grethe J., Gupta A., Fennema-Notestine C., Laird A., Larson S., Rubin D., Shepherd G., Turner J., Martone M.: The NIFSTD and BIRNLex vocabularies: Building comprehensive ontologies for neuroscience. Neuroinformatics, 6:175-94(2008).

Halavi M., Polavaram S., Donohue D., Hamilton G., Hoyt J., Smith K., Ascoli G.: NeuroMorpho.Org implementation of digital neuroscience: dense coverage and integration with the NIF. Neuroinformatics, 6:241-52(2008).

Ascoli G., Samsonovich A.: Science of the conscious mind. Biol. Bull., 215:204-15 (2008).

Hemond P., Migliore M., Ascoli G., Jaffe D.: The membrane response of CA3 pyramidal neurons near rest: heterogeneity of passive properties and the contribution of hyperpolarization-activated currents. Neuroscience. Vol. 160 (2), pp. 359-70 (2009)

Komendantov A., Ascoli G.: Dendritic excitability and neuronal morphology as determinants of synaptic efficacy. J Neurophys. Vol. 101 (4), pp. 1847-66 (2009)

E.Barreto (2008) Shadowing. Scholarpedia, 3(1):2243.

E. Barreto, B. Hunt, E. Ott, and P. So. Synchronization in Networks of Networks: The Onset of Coherent Collective Behavior in Interacting Populations of Heterogeneous Oscillators. Physical Review E  77, 036107 (2008).

Blackwell K.T., Farley J. (2008) Hermissenda. Scholarpedia, 3(7):4090

Ferrante M., Blackwell K.T., Migliore M., Ascoli G.A. (2008) Computational Models of Neuronal Biophysics and the Characterization of Potential Neuropharmacological Targets. Current Medicinal Chemistry, 15: 2456-2471

Butler, Ann B. 2008. Brain evolution and comparative neuroanatomy.  In: Encyclopedia Of Life Sciences, John Wiley & Sons, Ltd. Chichester, UK, http://www.els.net/ [DOI: 10.1002/9780470015902.a0000088.pub2]. [Update of 2001b article.]

Butler, A. B. 2008. Evolution of brains, cognition, and consciousness. Brain Res. Bull., 75: 442-449.

Butler, A. B. 2008. Evolution of the dorsal thalamus: A morphological-functional review. Thalamus and Related Structures, 2008, 4(1), 35–58. DOI 0.1017/S1472928808000356.

Camelli F, Cebral JR, Löhner R, “Timings of an Unstructured-Grid CFD Code on Common Hardware Platforms and Compilers”, AIAA-2008-0477, 46th Aerospace Sciences Meeting and Exhibit, Reno Nevada, January 7-10, 2008.

Appanaboyina S, Mut F, Löhner R, Escrivano E, Miranda C, Lylyk P, Putman CM, Cebral J.R., “Computational modeling of blood flow in side arterial branches after stenting of intracranial aneurysms”, Int J CFD, 22(10), 669-676, 2008.

Chien A, Tateshima S, Castro M, Sayre J, Cebral J.R., Viñuela F, “Patient-specific flow analysis of brain aneurysms at a single location: comparison of hemodynamic characteristics in small aneurysms”, Med Biol Eng Comput 46(11): 1113-1120, 2008.

Radaelli AG, Ausburger L, Cebral J.R., Ohta M, Rüfenacht DA, Balossino R, Benndorf G, Hose DR, Marzo A, Metcalfe R, Mortier P, Mut F, Reymond P, Socci L, Verhegghe B, Frangi AF, “Reproducibility of haemodynamical simulations in a subject-specific stented aneurysm model – A report on the Virtual Intracranial Stenting Challenge 2007”, J. Biomech., 41(10): 2069-2081, 2008.

Cebral J.R., Castro MA, Putman CM, Alperin N, “Flow-area relationship in internal carotid and vertebral arteries”, Physiol. Meas. 29: 585-594, 2008.

Löhner R, Cebral J.R., Camelli F, Appanaboyina S, Baum JD, Mestreau EL, Soto O, “Adaptive embedded and immersed unstructured grid techniques”, Comp Meth Appl Mech Eng 197: 2173-2197, 2008.

Appanaboyina S, Mut F, Löhner R, Putman CM, Cebral J.R,, “Computational Fluid Dynamics of Stented Intracranial Aneurysms using Adaptive Embedded Unstructured Grids”, Int. J. Num. Methods Fluids, 57(5): 475-493,  2008.

Aubry R, Mut F, Löhner R, Cebral J.R., “Deflated preconditioned conjugate gradient solvers for the pressure-Poisson equation”, J Comp Phys, 227(24):10196-10208, 2008.

Löhner R, Appanaboyina S, Cebral J.R., “Parabolic Recovery of Boundary Gradients”, Comm Num Meth Eng, 24(12), 1611-1615, 2008 (DOI: 10.1002/cnm.1054).

Löhner R, Appanaboyina S, Cebral J.R., “Comparison of Body-Fitted, Embedded and Immersed Solutions of Low Reynolds-Number 3-D Incompressible Flows”, Int J Num Methods Fluids, 57(1): 13-30, 2008 (DOI: 10.1002/fld.1604).

Cioffi-Revilla, Claudio, J. Daniel Rogers, and Maciej Latek. 2008. The MASON HouseholdWorld Model of Pastoral Nomad Societies. In Proceedings of the Second World Congress in Social Simulation, Center for Social Complexity, George Mason University, Fairfax, VA 22030, USA, 14-17 July, 2008.

S.J. Schiff, J.R. Cressman, E. Barreto, and J. Ziburkus. Towards a Dynamics of Seizure Mechanics. In Computational Neuroscience in Epilepsy, I. Soltesz and K. Stanley, eds.
Academic Press, January 14, 2008 (ISBN-10: 0123736498)

G. Ullah, J.R. Cressman, E. Barreto, and S.J. Schiff. The Influence of Sodium and Potassium Dynamics on Excitability, Seizures, and the Stability of Persistent States: II. Network and Glial Dynamics.  Journal of Computational Neuroscience Vol. 26:2 (April, 2009; published online 13 December 2008).

Bilda, Z. and Gero, J.S. (2008) Idea development can occur using imagery only during early conceptual designing, in JS Gero and AK Goel (eds), Design Computing and Cognition'08, Springer: 303-320.

Gero, J.S. and Kannengiesser, U. (2008) An ontological account of Donald Schon's reflection in designing, International Journal of Design Sciences and Technologies 15(2): 77-90.

Gero, J.S. and Sosa, R. (2008) Complexity measures as a basis for mass customisation of novel designs, Environment and Planning B 35(1): 3-15.

Kan, J. and Gero, J.S. (2008) Acquiring information from linkography in protocol studies of designers, Design Studies 29(4): 315-337.

Sarkar, S., Dong, A. and Gero, J.S. (2008) Learning symbolic formulations in design optimization, in J.S. Gero and A.K. Goel (eds), Design Computing and Cognition'08, Springer: 533-552.

Sosa, R. and Gero, J.S. (2008) Social structures that promote change in a complex world: The complementary roles of strangers and acquaintances in innovation, Futures 40(6): 577-585.

M. A. Hannan, N. Kabbani, C. D. Paspalas, and R. Levenson. Interaction with Dopamine D2 Receptor Enhances Expression of Transient Receptor Potential Channel 1 at the Cell Surface. Biochim et Biophys Acta. 2008. 1778(4): 974-982.

N.Kabbani. “Proteomics of membrane receptors and signaling”. Proteomics. 2008. 8 (19): 4146-55.

Olds, J.L. (2008) Science rebooted: what the trend toward on-line collab-
oration might mean for a journal like The Biological Bulletin. Biol. Bull.
215:1-2

de Visser, E., Horvath, D., & Parasuraman, R. (2008). Adaptive automation enhances human supervision of multiple uninhabited vehicles. In  D. de Waard, F. O. Flemisch, B. Lorenz, H. Oberheid, & K. Brookhuis (Eds.) Human Factors for Assistance and Automation.  (pp. 285-300). Maastricht, The Netherlands: Shaker Publishing.

Fu, S., Zinni, M., Squire, P. N., Kumar, R., Caggiano, D. M., &  & Parasuraman, R. (2008). When and where perceptual load interacts with voluntary visuospatial attention: An event-related potential and dipole modeling study. Neuroimage, 39, 1345-1355.

Parasuraman, R., & Hancock, P. A. (2008). Mitigating adverse effects of workload, stress, and fatigue with adaptive automation. In P. A. Hancock & J. Szalma (Eds.) Performance Under Stress. (pp. 45-57). Burlington, VT: Ashgate.

Parasuraman, R., Sheridan, T. B., & Wickens, C. D. (2008). Situation awareness, mental workload, and trust in automation: Viable, empirically supported cognitive engineering constructs. Journal of Cognitive Engineering and Decision Making, 2, 141-161.

Parasuraman, R, & Wickens, C. D. (2008). Humans: Still vital after all these years of automation. Human Factors, 50, 511-520.

Parasuraman, R., & Wilson, G. F. (2008). Putting the brain to work: Neuroergonomics past, present, and future. Human Factors, 50, 468-474.

Sanquist, T. F., Minsk, B., & Parasuraman, R. (2008). Cognitive engineering in radiation screening for homeland security.  Journal of Cognitive Engineering and Decision Making, 2,204-219.

Sanquist, T. F., Doctor, P., & Parasuraman, R. (2008).  A threat display concept for radiation detection in homeland security cargo screening. IEEE Transactions on Systems, Man, and Cybernetics. Part C. Applications, 38, 856-860.

Warm, J. S., Parasuraman, R., & Matthews, G. (2008). Vigilance requires hard mental work and is stressful. Human Factors, 50, 433-441.

 P. So, B.C. Cotton, and E. Barreto. Synchronization in Interacting Populations of Heterogeneous Oscillators with Time-Varying Coupling.
Chaos 18, 037114 (2008).

 

2007

Ascoli, G. Biomedical research funding: When the game gets tough, winners start to play. BioEssay, 29: 933-936 (2007).

Ascoli, G. (2007). Successful grant fishing in funding droughts. Nature Cell Biology 9(8): 856-857.

Ascoli, G., Donahue, D., Halavi, M.: NeuroMorpho.Org- A central resource for neuronal morphologies. J. Neurosci. 27:9247-51 (2007)

Ascoli, G.: Successes and rewards in sharing digital reconstructions of neuronal morphology. Neuroinformatics. 5: 154-160 (2007).

Berzhanskaya, J. and Ascoli, G. (2007). Computational Neuroanatomy. Scholarpedia.

Duque A., Tepper., Detari, L., Ascoli, G., Zaborszky, L. : Morphological characterization of electrophysiologically identified basal forebrain neurons: cholinergic vs. neuropeptide Y-containing neurons. Brain Struct. Funct., 1:55-73 (2007).

Samsonovich, A., Giorgio Ascoli, and Kenneth DeJong. "Computational Assessment of the 'Magic' of Human Cognition." IEEE Neural Networks 2006 (2007): 1170-77.

Liu, Y., and Giorgio Ascoli. "Value Added by Data Sharing -Long Term Potentiation of Neuroscience Research." Neuroinofmatics, no. 5 (2007): 143-45.

Löhner, R., Juan R. Cebral, F. Camelli, S. Appanaboyina, J. Baum, E. Mestreau, and O. Soto. "Adaptive Embedded and Immersed Unstructured Grid Techniques." Arch Comput Methods Eng 14, no. 3 (2007): 279-301.

Millan, D., L. Dempere-Marco, J.M. Pozo, Juan R. Cebral, and A. Frangi. "Morphological Characterization of Intracranial Aneurysms by Using 3d Moment Invatiants." IEEE Trans Med Imaging 26, no. 9 (2007): 1270-82.

Wood, B.J, J.K Locklin, A. Viswanathan, J. Kruecker, D. Haemerich, Juan R. Cebral, A. Sofer, R. Cheng, E. McCreedy, K. Cleary, M. McAuliffe, N. Glossop, and J. Yanoff. "Technologies for Guidance of Radiofrequency Ablation in the Multimodality Interventional Suite of the Future." J Vascular Interventional Radiology 18, no. 1 (2007): 9-24.

Cebral, J. R., R. Pergolizzi, et al. (2007). "Computational Fluid Dynamics Modeling of Intracranial Aneurysms: Qualitative Comparison with Conventional Angiography." Acad Radiol 14(7): 804-813.

Cox, Daniel N. and M. J. Sulkowski (2007). "Turtle, a novel immunoglobulin superfamily member, is required for dendrite morphogenesis in a subset of Drosophila PNS sensory neurons." Departmental Biology 306(1): 436-437.

N. Kabbani and R. Levenson.  A Proteomic Approach to Receptor Signaling: Molecular Mechanisms and Therapeutic Implication Derived from Discovery of the Dopamine D2 Receptor Signalplex. Eur J Pharmacol. 2007.  572 (2-3): 83-93. 

N. Kabbani, M.P. Woll, R. Levenson, J.M. Lindstrom, and J.P. Changeux.  Intracellular complexes for the b2 subunit of the nicotinic acetylcholine receptor in brain identified by proteomics. Proc Natl Acad Sci. 2007. 104(51): 20570-5.
N. Kabbani.  “Protein Interactions in Dopamine Receptor Signaling: From Receptor Complexes to Brain Disease” in Molecular Interactions of G Protein-Coupled Receptors, edited by Francisco Ciruela Alférez.  NOVA Science Publishers, 2007. ISBN: 1-60021-915-2.

Gunnthorsdottir, A., D. Houser, and Kevin McCabe. "Disposition, History, and Contributions in Public Goods Experiments." Journal of Economic Behavior and Organizations 62, no. 2 (2007): 304-15.

 

McCabe, Kevin, and L. Inglis. "Using Neuroeconomics Experiments to Study Tort Reform." Frederic Sautet ed., Mercatus Policy Comment 16, November 2007 (2007): 1-20.

Lohrenz, T., Kevin McCabe, C. Camerer, and R. Montague. "Neural Signature of Fictive Learning Signals in a Sequential Investment Learning Task." Proceedings of the National Academy of Sciences 104 no. 22 (2007): 9493-98.

Rigdon, M., Kevin McCabe, and Vernon Smith. "Sustaining Cooperation in Trust Games." Economic Journal 117, no. 522 (2007): 991-1007.

Krueger, F., Kevin McCabe, J. Moll, N. Kriegeskorte, R. Zahn, M. Strenziok, A. Heinecke, and J. Grafman. "Neural Correlates of Trust Proceedings of the National Academy of Sciences." Proceedings of the National Academy of Sciences 104, no. 50 (2007): 20084-89.

Baker J.L. and Olds J.L. (2007) Theta Phase Precession Emerges from a Hybrid Computational Model of a CA3 Pyramidal Cell. J. Cognitive Neurodynamics 1: 237-248


Parasuraman, R., & Espeseth, T. (2007). Genetic and neuroimaging studies of cholinergic and neurotrophic modulation of visual attention. Progress in Natural Science, 17. 7-18.


Miller, C., and Raja Parasuraman. "Designing for Flexible Interaction between Humans and Automation: Delegation Interfaces for Supervisory Control." Human Factors 49, no. 1 (2007): 57-75.

Helton, W. S., Hollander, T. H., Warm, J. S., Tripp, L. D., Parsons, K., Matthews, G., Dember, W. N., & Parasuraman, R. (2007). The abbreviated vigilance task and cerebral hemodynamics. Journal of Clinical and Experimental Neuropsychology, 29 (5), 545-552.

Parker, Dawn, and D. Munroe. "The Geography of Market Failure: Edge-Erect Externalities and the Location and Production Patterns of Organic Farming." Ecological Economics 60, no. 4 (2007): 821-33.


Robinson, D., D. Brown, Dawn Parker, P. Scheinemachers, M. Janssen, M. Huigen, H. Wittmer, N. Gotts, P. Promburom, E. Irwin, T. Berger, F. Gatzwiller, and C. Barnaud. "Comparison of Empirical Methods for Building Agent-Based Models in Land-Use Science." Jounral of Land-Use Science 2, no. 1 (2007): 31-55.


Parker, Dawn. "Revealing 'Space' in Spatial Externalities: Edge-Erect Externalities and Spatial Incentives." Journal of Environmental Economics and Management 54, no. 1 (2007): 84-99.

So, Paul (2007), “Unstable Perdiodic Orbits,” Scholarpedia.

 

2006

Samsonovich A., Ascoli G.: Morphological homeostasis in cortical dendrites. Proc. Natl. Acad. Sci. USA, 103:1569-1574 (2006).

Ascoli G.: Mobilizing the base of neuroscience data: the case of neuronal morphologies. Nature Rev. Neurosci., 7:318-324 (2006).

Ascoli G., Domenici E., Bertucci C.: Drug binding to Human Serum Albumin: Abridged review of results obtained with High Performance Liquid Chromatography and circular dichroism. Chirality, 18:667-679 (2006).

Li X., Ascoli G.: Computational simulation of the input-output relationship in hippocampal pyramidal cells. J. Comput. Neurosci., 21:191-209 (2006).

Krichmar J., Velasquez D., Ascoli G.: Effects of beta-catenin on dendritic morphology and simulated firing patterns in cultured hippocampal neurons. Biol. Bull., 211:31-43 (2006).

Ascoli G., Scorcioni R.: Neuron and network modeling. In Zaborszky L., Wouterlood, Lanciego J. (Eds.): Tract Tracing Methods, 3rd ed., 604-630, Springer, New York NY (2006).

Ascoli G., McCabe K.: Scarcity begets addiction. Commentary on Lea & Webley's "Money as tool, money as drug". Behav. Brain. Sci., 29(2):178 (2006).

Samsonovich A., Ascoli G. DeJong K, Coletti M.: Integrated hybrid cognitive architecture for a virtual roboscout. AAAI Report Cognitive Robotics WS-06-03:129-134 (2006).

Samsonovich A., Ascoli G., DeJong K.: Human-level psychometrics for cognitive architectures. In Smith L., Sporns O., Yu C., Gasser M., Breazeal C., Deak G., Weng J. (Eds.): Proc. 5th Int. Conf. Dev. & Learning ICDL 2006, Bloomington, IN (2006).

Interneuron and Pyramidal Cell Interplay During In Vitro Seizure-like Events. Jokubas Ziburkus, John R. Cressman, Ernest Barreto, and Steven J. Schiff
Journal of Neurophysiology, Vol. 95, pp. 3948-3954 (2006).

Dynamics of Noninvertibility in Delay Equations. Evelyn Sander, Ernest Barreto, S. Schiff, and P. So. Discrete and Continuous Dynamical Systems, Supplementary Volume, pp. 768-777 (August 2005).

J. Hellgren Kotaleski, D. Plenz and K.T. Blackwell: Using Potassium Currents to Solve Signal-to-Noise Problems in Inhibitory Feedforward Networks of the Striatum. Journal of Neurophysiology 95:331-341 (2006)

Nicholas Gustafson, Elakkat Gireesh-Dharmaraj, Uwe Czubayko, Kim T. Blackwell, and Dietmar Plenz. (2006)A Comparative Voltage and Current-Clamp Analysis of Feedback and Feedforward Synaptic Transmission in the Striatal Microcircuit In Vitro. Journal of Neurophysiology 95: 737-752

 Blackwell K.T. (2006)Subcellular, Cellular, and Circuit Mechanisms Underlying Classical Conditioning in Hermissenda crassicornis. The Anatomical Record (Part B: New ANAT) 289B: 25-37

 Blackwell K.T. (2006)An efficient stochastic diffusion algorithm for modeling second messengers in dendrites and spines. Journal of Neuroscience Methods 157; 142-153.

Maria Lindskog, Myungsook Kim, Martin A Wikstrom, Kim T. Blackwell, Jeanette Hellgren Kotaleski. (2006) Transient calcium and dopamine increase PKA activity and DARPP-32 phosphorylation. PLOS Computational Biology (Sept 2006); Vol 2, Iss 9, e119.

Blackwell, K. T. Ionic currents underlying difference in light response between type A and type B photoceptors. J Neurophsiol. 2006 May; 95 (5) : 3060-72

Gustafson, N., E. Gireesh-Dharmaraj, et al. A Comparitive Voltage and Current-Clamp Analysis of Feedback and Feedforward Synaptic Transmission in the Striatal Microcircuit in Vitro. Journal of Neurophysiology 95 (2006): 737-52 [K. T. Blackwell.]

Butler , Ann B. 2006 The serial transformation hypothesis of vertebrate origins: comment on “The new head hypothesis revisited.” J. Exp. Zool. (Mol. Dev. Evol.), 306B [Epub ahead of print].

Butler , Ann. B. and Rodney M. J. Cotterill 2006 Mammalian and avian neuroanatomy and the question of consciousness in birds. Biol. Bull., 211: 106-127.

Butler , Ann B. 2006 The Dual Elaboration Hypothesis of the Evolution of the Dorsal Thalamus. In L. A. Krubitzer and J. H. Kaas (eds.), Evolution of Nervous System in Mammals. Amsterdam: Elsevier, pp. 517-523.

Castro, M.A., C.M. Putman, and J.R. Cebral, "Computational fluid dynamics modeling of intracranial aneurysms: effects of parent artery segmentation on intra-aneurysmal hemodynamcis". AJNR, 27: 1703-1709, 2006

Castro MA, Putman CM, Cebral JR, "Patient-Specific Computational Modeling of Cerebral Aneurysms with Multiple Avenues of Flow from 3D Rotational Angiography Images", Academic Radiology, 13(7): 811-821, 2006

Cebral, J. R., M. A. Castro, et al. "A Study of Hemodynamics of Anterior Communicating Artery Aneurysms." Proceedings SPIE Medical Imaging 6143 (2006): 166-75.

Adam Campbell, Annie S. Wu, Keith Garfield, Randall Shumaker, Sean Luke, and Kenneth A. De Jong (2006) Emperical Study on the Effects of Synthetic Social Structures on Teams of Autonomous Vehiles . In Proceedings of International Conference on Networking, Sensing, and Control.  Pages 440 – 445.

Elena Popovici and Kenneth De Jong (2006) Sequential Versus Parallel Cooperative Coevolutionary Algorithms for Optimization. In Proceedings of Congress on Evolutionary Computation.

Elena Popovici and Kenneth De Jong (2006) The Effects of Interaction Frequency on the Optimization Performance of Cooperative Coevolution. In Proceedings of Genetic and Evolutionary Computation Conference

Elena Popovici and Kenneth De Jong (2006) The Dynamics of the Best Individuals in Co-Evolution. Natural Computing, 5(3) : 229 – 255

Alexei V. Samsonovich, Giorgia Ascoli, and Kenneth De Jong (2006) Computational Assessment of the 'Magic' of Human Congnition. In Proceedings of World Congress on Computational Intelligence

Leonard, C., Eckert, M., Given, B. K., Berninger Virginia and Guinevere Eden. (2006) Individual differences in anatomy predict reading and oral language impairments in children. Brain 129; 3329-3342.

Given, B. K. (2006).  Learning styles as theaters of the mind. European Learning Styles International Network Conference Proceedings, Oslo, Norway.

Schiff, S., Kruglikov, S. Chari, S., Rapp, P. Weinstein, S. & Given, B. (July 2006). Fully Optimized Discrimination of Physiological Responses to Auditory Stimuli. CNS: Cognitive Neuroscience Society Proceedings, Edinburgh, UK

Matukumalli LK, Grefenstette JJ, Hyten DL, Choi IY, Cregan PB, and Van Tassell CP (2006). Application of machine learning in SNP discovery. BMC Bioinformatics 7: 4.

M. Basile, R. Lin, N. Kabbani, K. Karpa, M. Kilimann, I. Simpson, and M. Kester.  Paralemmin interacts with D3 dopamine receptors: Implications for membrane localization and cAMP signaling. Arch Biochem Biophys. 2006. 446(1): 60-8.

N. Kabbani and R. Levenson.  Antipsychotic induced alterations in D2 dopamine receptor interacting proteins in the cortex.  Neuroreport. 2006. 17(3): 299-301.

Kalbfleisch, M.L., Van Meter, J.W., Zeffiro, T.A. (2006). The Influences of Task Difficulty and Response Correctness on Neural Systems Supporting Fluid Reasoning. Cognitive Neurodynamics, DOI10.1007/s11571-006-9007-4. ISSN: 1871-4080 (Print) 1871-4099 (Online)

Penberthy, J.K., Kalbfleisch, M.L., Quigg, M., Loboschefski, T., Cox, D., Runyon, C., Kovatchev, B. (2006). Electroencephalographic Profiles of Children with Symptoms of Attention Deficit Hyperactivity Disorder: A Review of the Literature. Current Pediatric Reviews, 2(4), 17-32.

Morowitz, H. “The Origin of Life…Through Chemistry,” National Geographic, March 2006, describing his research and Robert Hazen’s book Genesis.

Morowitz, H. “Closure as a scientific concept and its application to ecosystem ecology and the science of the biosphere,” with J.P. Allen, M. Nelson, and A. Alling, in Science Direct Advances in Space Research 36 (2005), 1305-1311

Morowitz, H. “Ancient genes in contemporary persistent microbial pathogens,” with V. Srinivasan, The Biological Bulletin 210: 1-9, February 2006

Smith, E., H.J. Morowitz, et al. "Experimental search for minimal organisms and the last common ancestor." Complexity 12, no. 1 (2006).

Morowitz, H. “The Swiss Army Knife of Biological Catalysis,” with V. Srinivasan and E. Smith, in Complexity.

Palkovich, A. 2006 Joe Gay Mound Group. Crematory A Excavations.
The 1970s Joe Gay Mound Excavations. In: Illinois Hopewell and Late Woodland Mounds: The Excavations of Gregory Perino. 19501975.
Center for American Archaeology Publications, p386388. (with Della C. Cook)

Palkovich, A. 2006 Race. Science and Society. In: Proceedings, TAM 4.
Ray Brown, editor, James Randi Foundation.

Caggiano, D., Jiang, Y., & Parasuraman, R. (2006). Aging and repetition priming for targets and distracters in a working memory task. Aging, Neuropsychology, and Cognition, 13, 1-22.

Espeseth, T. Greenwood, P. M., Reivang, I., Fjell, A. M., Walvhold, K. B., Westlye, E., Lundervold, A., Rootvelt, H., & Parasuraman, R. (2006). Interactive effects of APOE and CHRNA4 on attention and white matter volume in healthy middle-aged and older adults. Cognitive, Affective, and Behavioral Neuroscience,6(1), 31-43.

Metzger, U., & Parasuraman, R. (2006). Effects of automated conflict cueing and traffic density on air traffic controller performance and visual attention in a datalink environment. International Journal of Aviation Psychology, 16, 343-362.

Sheridan, T., & Parasuraman, R. (2006). Human-automation interaction. Reviews of Human Factors and Ergonomics, 1, 89-129.

Sunderam S., Chernyy N., Mason J., Peixoto N., Weinstein S.L., Schiff S.J., Gluckman B.J.. Seizure Modulation with Applied Electric Fields in Chronically Implanted Animals. Proceedings of the 28th IEEE EMBS Annual International Conference, p1612-1615, 2006

Aina Puce, James A. Epling, James C. Thompson and Olivia K. Carrick, Neural responses elicited to face motion and vocalization pairings, Neuropsychologia, Volume 45, Issue 1, The Perception of Emotion and Social Cues in Faces, 2007, Pages 93-106.

 

2005

 Ascoli G. and Grafman J. (Eds.): Consciousness, Mind and Brain (10 chapters, 122 pages). Massom Publisher, Milan, Italy (2005).

 Ascoli G. , Atkeson J.: Incorporating anatomically realistic cellular-level connectivity in neural network models of the rat hippocampus. Biosystems, 79:173-181 (2005).

Li Y., Brewer D., Burke R.E., Ascoli G.: Developmental changes in spinal motoneuron dendrites in neonatal mice. J. Comp. Neurol. 483:304-317 (2005).

Samsonovich A., Ascoli G.: Statistical determinants of dendritic morphology in hippocampal pyramidal neurons: a hidden Markov model. Hippocampus 15:166-183 (2005).

Samsonovich A., Ascoli G.: A simple neural network model of the hippocampus suggesting its role in the navigation of memory. Learning & Memory, 12:193-208 (2005).

Scorcioni R., Ascoli G.: Algorithmic reconstruction of complete axonal arborizations in rat hippocampal neurons. Neurocomputing, 65-66:15-22 (2005).

Samsonovich A., Ascoli G.: Algorithmic description of hippocampal granule cell dendritic morphology. Neurocomputing, 65-66:253-260 (2005).

Samsonovich A., Ascoli G.: The conscious self: ontology, epistemology and the mirror quest. Cortex, 41:621-636 (2005).

Donohue D., Ascoli G.: Local diameter fully constrains dendritic size in basal but not apical trees of CA1 pyramidal neurons. J. Comput. Neurosci., 19:223-238 (2005).

Brown K., Donohue D., D’Alessandro G., Ascoli G.: A cross-platform freeware tool for digital reconstruction of neuronal arborizations from image stacks. Neuroinformatics, 3:343-360 (2005).

Migliore M., Ferrante M., Ascoli G.: Signal propagation in oblique dendrites of CA1 pyramidal cells. J. Neurophys., In Press (2005).

 Samsonovich A., Ascoli G .: Morphological homeostasis in cortical dendrites. Submitted (2005).

 Li X., Ascoli G .: Computational simulation of the input-output relationship in hippocampal pyramidal cells. Submitted (2005).

Duque A., Tepper J., Ascoli G., Zaborszky L.: Morphological characterization of electrophysiologically identified basal forebrain neurons: cholinergic vs. neuropeptide Y-containing neurons. Submitted (2005)

 Ascoli G. , Domenici E., Bertucci C.: Drug binding to Human Serum Albumin: Abridged review of results obtained with circular dichroism and High Performance Liquid Chromatography. Submitted (2005).

 Robert L. Axtell. “The Complexity of Exchange,” 2005, Economic Journal, vol. 115, no. 504 (June): 193-210

 Blackwell K.T. (2005) A New Era in Computational Neuroscience. Neuroinformatics 3: 163-166

The Avian Brain Nomenclature Forum [ Jarvis, E. D., Güntürkün, O., Bruce, L., Csillag, A., Karten, H., Kuenzel, W., Medina, L., Paxinos, G., Perkel, D. J., Shimizu, T., Striedter, G., Wild, J. M., Ball, G. F., Dugas-Ford, J., Durand, S. E., Hough, G. E., Husband, S., Kubikova, L., Lee, D. W., Mello, C. V., Powers, A., Siang, C., Smulders, T. V., Wada, K., White, S. A., Yamamoto, K., Yu, J., Reiner, A., and Butler, A. B.] 2005 Avian brains and a new understanding of vertebrate brain evolution. Nature Rev. Neurosci., 6: 151-159.

Butler , Ann B., Paul R. Manger, Ingemar B. Lindahl, and Peter Århem 2005 Evolution of the neural basis of consciousness: a bird-mammal comparison. BioEssays, 27: 923-936.

Dumas, TC (2005) Developmental regulation of cognitive abilities: modified composition of a molecul ar switch turns on associ ative le arning. Prog Neurobiol 76:189–211.

Theodore C. Dumas. (2005) Late postnatal maturation of excitatory synaptic transmission permits adult-like expression of hippocampal-dependent behaviors. Hippocampus 15:5, 562

 A Model of the Effects of Applied Electric Fields on Neuronal Synchronization. The Journal of Computational Neuroscience19 53-70 (2005). Eun-Hyoung Park , Ernest Barreto, Bruce J. Gluckman, Steven J. Schiff, and Paul So

 Control of Traveling Waves in Mammalian Cortex. Physical Review Letters94 028103 (2005). Kristen A. Richardson, Steven J. Schiff, and Bruce J. Gluckman

 Grefenstette JJ , Kim S, Kauffman SA (2005, in press). An analysis of the class of gene regulatory functions implied by a biochemical model. BioSystems.

Doung D and Grefenstette J (2005). SISTER: a Symbolic Interactionist Simulation of Trade and Emergent Roles. Journal of Artificial Societies and Social Simulation 8(1).

A.V. Binda, N.Kabbani, and R. Levenson.  Dense core vesicle release from PC12 cells regulated by interaction between the D2 dopamine receptor and calcium activator protein for secretion (CAPS).  Biochem Pharmacol. 2005. 69(10): 1451-1461.

N. Kabbani, M. Hannan, and R. Levenson.  Unraveling the dopamine receptor signalplex with DRIPs and DRAPs. Curr Proteomics. 2005. 2 (3): 209-224.

B. Blasiole, N.Kabbani, B.  Thisse, C.  Thisse, V. Canfield, and R. Levenson.  The Neuronal Calcium Sensor-1 Gene ncs-1a, is Essential for Semicircular Canal Formation in the Zebrafish Inner Ear.  J Neurobiol.  2005. 64(3): 285-97.

Penberthy, J.K., Kalbfleisch, M.L., Quigg, M.L., Loboschefski, T., Kovatchev, B., Cox, D. (2005). Electroencephalographic profiles of children with symptoms of attention deficit hyperactivity disorder.  Current Pediatric Reviews (in-press).

Penberthy, J.K., Cox, D., Breton, M., Robeva, R., Kalbfleisch, M.L., Loboschefski, T., Kovatchev, B. (2005). Calibration of ADHD assessments across studies: A meta-analysis tool. Applied Psychophysiology and Biofeedback, 30 (1), 31-51.

Olds, J.L. (2005) The Biological Bulletin-A Message from the Editor 208:1-2

Metzger, U., & Parasuraman, R. (2005). Automation in future air traffic management: Effects of decision aid reliability on controller performance and mental workload. Human Factors, 47(1), 35-49.

Parasuraman, R., Galster, S., Squire, P., Furukawa, H., & Miller, C. (2005). A flexible delegation interface enhances system performance in human supervision of multiple autonomous robots: Empirical studies with RoboFlag. IEEE Transactions on Systems, Man, and Cybernetics. Part A: Systems and Humans, 35(4), 481-493.

Parasuraman, R., Greenwood, P. M., Kumar, R., & Fossella, J. (2005). Beyond heritability: Neurotransmitter genes differentially modulate visuospatial attention and working memory. Psychological Science, 16(3), 200-207.

 A Model of the Effects of Applied Electric Fields on Neuronal Synchronization. The Journal of Computational Neuroscience19 53-70 (2005). Eun-Hyoung Park , Ernest Barreto, Bruce J. Gluckman, Steven J. Schiff, and Paul So

 Dynamics of Noninvertibility in Delay Equations. Discrete and Continuous Dynamical SystemsSupplement Volume (2005). Evelyn Sander, Ernest Barreto, Steven Schiff, and Paul So

Multivariate Linear Discrimination of Seizures. Clinical Neurophysiology116 545-551 (2005). Jerger, KK, Weinstein, SL, Sauer, T, and Schiff, SJ

Control of Traveling Waves in Mammalian Cortex. Physical Review Letters94 028103 (2005). Kristen A. Richardson, Steven J. Schiff, and Bruce J. Gluckman

Kathleen M. Carley, Jana Diesner, Maksim Tsvetovat, Jeffrey Reminga "Toward an Interoperable Dynamic Network Analysis Toolkit,"Journal of Decision Support Systems (DSS) Special Issue on Cyberinfrastructure for Homeland Security: Advances in Information Sharing, Data Mining, and Collaboration Systems; accepted for publication in 2005.

 Maksim Tsvetovat , Kathleen Carley "Structural Knowledge and Success of Anti-Terrorist Activity: The Downside of Structural Equivalence" Journal of Social Structure (www.joss.org), Volume 6, June 2005

 

2004

Scorcioni R., Lazarewicz M., Ascoli G.: Quantitative morphometry of hippocampal pyramidal cells: differences between anatomical classes and reconstructing laboratories. J. Comp. Neurol. 473:177-193 (2004).

D. Teitelbaum and Robert L. Axtell. “Firm Size Dynamics of Industries: Stochastic Growth Processes, Large Fluctuations, and the Population of Firms as a Complex System”, 2004, published by the U.S. Small Business Administration (NTIS order number: PB2005-101701)

 Blackwell K.T. (2004) Paired Turbulence and Light do not Produce a Supralinear Calcium Increase in Hermissenda. J Computational Neuroscience Jul-Aug;17(1):79-97

T.C. Dumas. (2004) Early eyelid opening enhances spontaneous alternation and accelerates the development of perforant path synaptic strength in the hippocampus of juvenile rats, Dev Psychobiol 45, pp. 1–9.

Given, B., Chari S., & Ennis, J. et al. (2004). Differences in low, average, and expert readers as measured by eeg/erps: preliminary findings and challenges of an in-school psycho-physiological research project. American Educational Research Association 2004 Annual Meeting, San Diego, CA. Conference Paper

Khan R, Alkharouf N, Beard H, Chouikha I, Meyer S, Grefenstette J, Knap H, and Matthews B (2004). Microarray analysis of gene expression in soybean roots susceptible to the soybean cyst nematode two days post invasion. Journal of Nematology 36(3):241-248.v

Matukumalli LK, Grefenstette JJ, Sonstegard TS, Van Tassell CP. (2004). EST-PAGE: managing and analyzing EST data. Bioinformatics 20(2), 286-288.

R.Lin, N. Kabbani, A.Binda, V.Canfield, and R.Levenson. “G Protein Coupled Receptor-Protein   Interactions”, in the series Receptor Biochemistry and Methodology, edited by David Sibley. John Wiley & Sons, 2004. ISBN: 0471235466

N. Kabbani, A.Jeromin, and R. Levenson.  Dynamin-2 associates with the dopamine receptor signalplex and regulates internalization of activated D2 receptors.  Cell Signaling.  2004. 16(4):497-503.

 Kalbfleisch, M.L . (2004). The functional neural anatomy of talent.  The Anatomical Record, 277B (1), 21-36

Olds, J.L.(2004) The Intellectual Property Conundrum for Biosciences. Anat. Rec. 277B:5-9
Olds, J.L.(In Press) Election 2004: The Implications for Biomedical Research. Anat. Rec.

 Sprial Waves in Disinhibited Mammalian Neocortex. The Journal of Neuroscience24 9897-9902 (2004). Xiaoying Huang, William C. Troy, Qian Yang, Hongtao Ma, Carlo R. Laing, Steven J. Schiff, and Jian-Young Wu

 Analytical Coupling Detection in the Presence of Noise and Nonlinearity. Physical Review E69 017201 (2004). Theoden I. Netoff, Louis M. Pecora and Steven J. Schiff

 Maksim Tsvetovat , Kathleen Carley "Modeling Complex Socio-technical Systems using Multi-Agent Simulation Methods" Kunstliche Intelligenz (Artificial Intelligence Journal), Special Issue on Applications of Intelligent Agents, June 2004, vol.2, Verlag.

 Maksim Tsvetovat , Kathleen Carley, Katia Sycara "A Multi-Agent Model of Emergence of Market Segmentation" in Modeling Autonomous Agents in a Multi-Agent World IV Lecture Notes on Artificial Intelligence 2004, Springer-Verlag Yves Demazeau, Francisco Garijo (Eds.) (to appear)

 

2003

Samsonovich A., Ascoli G.: Statistical morphological analysis of hippocampal principal neurons indicates selective repulsion of dendrites from their own cell. J. Neurosci. Res. 71:173-87 (2003).

 Ascoli G. : Passive dendritic integration heavily affects spiking dynamics of recurrent networks. Neural Networks, 16:657-663 (2003).

T. Yamashita, K. Kurumatani, Robert L. Axtell and A. Ohuchi. “Group Formation with Split Rule in Social Dilemmas” (with), 2003, in Proceedings of the Second International Joint Conference on Autonomous Agents and Multi-Agent SystemsAAMAS ( Melbourne, Victoria, Australia), ACM Press: N.Y.;

T. Yamashita, Robert L. Axtell, K. Kurumatani and A. Ohuchi. “Investigation of a Mutual Choice Metanorm in Group Dynamics for Solving Social Dilemmas”, 2003, in Multi-Agent Systems for Mass-User Support, K. Kurumatani, S-H. Chen and A. Ohuchi, eds., Lecture Notes in Artificial Intelligence, vol. 3012. Springer: N.Y.;

 Robert L. Axtell. “Economics as Distributed Computation,” 2003, in H. Deguchi, K. Takadama and T. Terano, eds., Meeting the Challenge of Social Problems via Agent-Based Simulation, Springer: Tokyo

 Robert L. Axtell. “Economics as Distributed Computation,” 2003, in H. Deguchi, K. Takadama and T. Terano, eds., Meeting the Challenge of Social Problems via Agent-Based Simulation, Springer: Tokyo

 Blackwell K.T. , Plenz D. (2003) Amplitude distribution and frequency of post-synaptic events in striatal neurons during the down-state. J. Neurosci., 23:9123-32

Mo J.L., Blackwell K.T., (2003) Comparison of Hermissenda type A and type B photoreceptor's response to light as a function of intensity and duration. J. Neurosci. 23:8020-8.

 Butler, Ann B.   2003b  Sensory systems and brain evolution across the Bilateria: commonalities and constraints. In: Sensory Processing of the Aquatic Environment, Collin S, Marshall J, eds). Berlin: Springer-Verlag, pp. 375-388.

Given, B. K.(2003). Learning styles/Learning systems instruction. In G. Heidenhain (Ed) Learning beyond boundaries: Fundamental experiences using accelerated learning. Colorado Springs, CO: An International Alliance for Learning Publication, pp. 83-86.
Given, B.K. (2003). Self-Administered, computer-driven, information processing assessment for adult literacy instruction. 21st Century Learning CAL '03 Conference Proceedings: Abstract book. Queen's University, Belfast, Northern Ireland. p. 82.

 In Vivo Modulation of Hippocampal Epilepiform Activity with Radial Electric Fields. Epilepsia44 768-777 (2003). Kristen A. Richardson, Bruce J. Gluckman, Steven L. Weinstein, Caryn E. Glosch, Jessica B. Moon, Ryder P. Gwinn, Karen Gale, and Steven J. Schiff

 Sensitivity of Neurons to Weak Electric Fields. Journal of Neuroscience23 7255-721 (2003). Joseph T. Francis, Bruce J. Gluckman, and Steven J. Schiff

 Electric Field Modulation of Synchronization in Neuronal Networks. Neurocomputing52-54 169-175 (2003). Eun-Hyoung Park, Paul So, Ernest Barreto, Bruce J. Gluckman, and Steven J. Schiff

Kim S, Weinstein JN, and Grefenstette JJ (2003). Inference of large-scale topology of gene regulation networks by neural nets. Proc. IEEE International Conference of Systems, Man, and Cybernetics, Washington, DC, IEEE, 3969-3975.

Lattner A.D., Kim S., Cervone G., and Grefenstette J. (2003). Experimental comparison of symbolic learning programs for the classification of gene network topology models. FGML 2003 Workshop, Annual Meetings of the GI Working Group -- Machine Learning, Knowledge Discovery, Data Mining, Karlsruhe, Germany, Oct 2003.

P.O. Koh, A.S. Undie, N.Kabbani, R. Levenson, P. S. Goldman-Rakic, and M. S. Lidow.  Up-regulation of neuronal calcium sensor-1 (NCS-1) in the prefrontal cortex of schizophrenic and bipolar patients. Proc Natl Acad Sci. 2003. 100(1): 313-317.

Devan, B.D., Stouffer, E.M., Petri H.L., Mcdonald, R.J. and Olds J.L. (2003) Partial Reinforcement Across Trials Impairs Escape Performance but Spares Place Learning in the Water Maze. Behavioral Brain Research 141:91-104.

 Interplay of EEG phase and auditory evoked neural activity. Journal of Neuroscience23: 10122-10127 (2003). Kruglikov, SY and Schiff, SJ

 In Vivo Modulation of Hippocampal Epilepiform Activity with Radial Electric Fields. Epilepsia44 768-777 (2003). Kristen A. Richardson, Bruce J. Gluckman, Steven L. Weinstein, Caryn E. Glosch, Jessica B. Moon, Ryder P. Gwinn, Karen Gale, and Steven J. Schiff

 Sensitivity of Neurons to Weak Electric Fields. Journal of Neuroscience23 7255-721 (2003). Joseph T. Francis, Bruce J. Gluckman, and Steven J. Schiff

 Electric Field Modulation of Synchronization in Neuronal Networks. Neurocomputing52-54 169-175 (2003). Eun-Hyoung Park , Paul So, Ernest Barreto, Bruce J. Gluckman, and Steven J. Schiff

 Synchrony in Globally Coupled Chaotic, Periodic, and Mixed Ensembles of Dynamical Units. A. Pikovsky and Y. Maistrenko (eds.) Synchornization: Theory and Application 175-186 (2003). Edward Ott, Paul So, Ernest Barreto, and Thomas Antonsen

 Pattern Formation in a Nonlinear Model for Animal Coats. Journal of Differential Equations191 143-174 (2003). Evelyn Sander and Thomas Wanner

 The Geometry of Chaos Synchronization. Chaos13 151 (2003). Ernest Barreto, Kresimir Josic, Carlos J. Morales, Evelyn Sander, and Paul So

 Smith, V. "Constructivist and Ecological Rationality," American Economic Review, 93(3), 2003, 465-508.

 Smith, V. "Positive Reciprocity and Intentions in Trust Games," with Kevin McCabe and Mary Rigdon, Journal of Economic Behavior and Organization, 52, 2003, 267-275.

 Maksim Tsvetovat , Katia Sycara, Yian Chen, James Ying"Customer Coalitions in Electronic Marketplaces" in Agent-Mediated Electronic Commerce III Lecture Notes on Artificial Intelligence 2003, Springer-Verlag Frank Dignum, Ulises Cortes (Eds.)

 

2002

 Ascoli G. (Ed.): Computational Neuroanatomy - Principles and Methods (19 chapters, 468 pages, plus CD-ROM). Humana Press, Totowa, NJ (2002).

Scorcioni R., Bouteiller J., Ascoli G.: A real-scale anatomical model of the dentate gyrus based on single cell reconstructions and 3D rendering of a brain atlas. Neurocomputing, 44-46:629-634 (2002).

 Ascoli G. : Neuroanatomical algorithms for dendritic modeling. Network: Comput. Neural Syst. 13:247-260 (2002).

Krichmar J., Nasuto S., Scorcioni R., Washington S., Ascoli G.: Effects of dendritic morphology on CA3 pyramidal cell electrophysiology: a simulation study. Brain Res., 941:11-28 (2002).

Lazarewicz M., Migliore M., Ascoli G.: A new bursting model of CA3 pyramidal cell physiology suggests multiple locations for spike initiation. Biosystems, 67:129-37 (2002).

 Robert L. Axtell, Joshua M. Epstein, Jeffrey S. Dean, George J. Gumerman, Alan C. Swedlund, Jason Harburger, Shubha Chakravarty, Ross Hammond, Jon Parker, and Miles Parker. “Population Growth and Collapse in a Multi-Agent Model of the Kayenta Anasazi in Long House Valley”, Proceedings of the National Academy of Sciences, vol. 99 (suppl. 3): 7275-7279; synopses by J. Diamond appeared in the 11 October 2002 issue of Nature and by G. Gumerman in the 14 September 2002 issue of Science News

 Robert L. Axtell . “Non-Cooperative Dynamics of Multi-Agent Teams,” 2002, in Proceedings of the First International Joint Conference on Autonomous Agents and Multi-Agent SystemsAAMAS (Bologna, Italy), M. Gini et al., eds., ACM Press: N.Y.; reprinted in Complexity in Economics, J. Barkley Rosser, ed., Edward Elgar: Cheltenham, UK (2004);

Kotaleski, J.H., Lester D., Blackwell K.T. (2002) Subcellular interactions between parallel fibre and climbing fibre signals in Purkinje cells predict sensitivity of classical conditioning to interstimulus interval. Integrative Physiological and Behavioral Science, 37:265-292

Hellgren Kotaleski J, Blackwell K.T . (2002) Sensitivity to interstimulus interval due to calcium interactions in the Purkinje cell spines, Neurocomputing, 44-46: 13-18

 Blackwell K.T. (2002) The effect of intensity and duration on the light induced sodium and potassium currents in the Hermissenda type B photoreceptor. J. Neuroscience.22:4217-4228

 Blackwell K.T. (2002) Calcium waves and closure of leak potassium currents caused byGABA stimulation of the type B photoreceptor of Hermissenda crassicornis. J. Neurophysiol. 87: 776-792

 Butler, Ann B .  2002b   Homology.  In: Encyclopedia of Neuroscience (ed. by G. Adelman and B. Smith), Elsevier, New York, in press.

 Butler, Ann B.   2002c  Homoplasy.  In: Encyclopedia of Neuroscience (ed. by G. Adelman and B. Smith), Elsevier, New York, in press.

 Butler, A.B. and Zoltán Molnár  2002  Development and evolution of the collopallium in amniotes: a new hypothesis of field homology. Brain Res Bull, 57: 475-479.

 Butler , Ann B., Zoltán Molnár, and Paul R. Manger 2002 Apparent absence of claustrum in monotremes: implications for forebrain evolution in amniotes. Brain Behav. Evol., 60: 230-240.

Molnár, Zoltán and Ann B. Butler  2002a  The corticostriatal junction: A crucial region for forebrain development and evolution. BioEssays, 24: 530-541.

Molnár, Zoltán and Ann B. Butler  2002b  Neuronal changes during forebrain evolution in amniotes: an evolutionary developmental perspective. In E.C. Azmitia, J. Defelipe, E.G. Jones, P. Rakic, and C.E. Ribak (eds.), Changing Views of Cajal’s Neuron, Progress in Brain Research, 136, pp. 21-38.

Given, Barbara K. (2002). Teaching to the brain's natural learning systems. Alexandria, VA: Association for Supervision and Curriculum Development.
Given, B. K.(2002). The overlap between brain research and research on learning style. In M. Valcke and D. Gombeir (Eds.) Learning styles Reliability and validity: Proceedings of the 7th Annual ELSIN Conference proceedings, June 26-28, 2002. Ghent University, Belgium, pp. 173-178.

A. Binda, N.Kabbani, R. Lin, and R. Levenson.  D2 and D3 dopamine receptor cell surface localization mediated by interaction with protein 4.1N.  Mol Pharmacol.  2002. 62 (3): 507-513.

N. Kabbani, L. Negyessy, R. Lin, P. Goldman-Rakic, and R.Levenson.  Interaction with neuronal calcium sensor NCS-1 mediates desensitization of the D2 dopamine receptor. J Neurosci. 2002.  22(19): 8476-8486.

 The Emergence of Everything. Oxford University Press, 2002, Morowitz, Harold J.

 Morowitz, Harold J . Foreword, Molecular Biology and Pathogenicity of Mycoplasmas, S. Razin and R. Herrmann, eds., Kluwer, 2002.

Devan, B. D., Petri, H. L., Mishkin, M., Stouffer, E. M., Bowker, J. M., Yin, P. B., Buffalari, D. M., & Olds, J. L. (2002). A Room with a view and a polarizing cue: Individual differences in the stimulus control of place navigation and passive latent learning in the water maze. Neurobiol Learn Mem 78 (1):79-99 JUL 2002.

 Failure of Single-Unit Neuronal Activity to Differentiate Globus Pallidus internus and externus in Parkinson Disease. The Journal of Neurosurgery97 119 (2002). Steven J. Schiff , M.D., Ph.D., Brian K. Dunagan, and Robert M. Worth, M.D., Ph.D.

 Decreased Neuronal Synchronization during Experimental Seizures. The Journal of Neuroscience22 7297 (2002). Theoden I. Netoff and Steven J. Schiff

 Limits to the Experimental Detection of Nonlinear Synchrony. Phys. Rev. E , 65 046225 (2002). Paul So, Ernest Barreto, Kresimir Josic, Evelyn Sander, and Steven J. Schiff

 Smith, V. "Method in Experiment: Rhetoric and Reality," Experimental Economics, 5(2), 2002, 91-110.

 Smith, V. “Sustaining Cooperation in Trust Games” (with Kevin McCabe and Mary Rigdon), 2002.

Maksim Tsvetovat , Kathleen Carley, Katia Sycara "Specialists, Generalists and Emergent Market Segmentation: a Multi-Agent Model" Journal of Computational and Mathematical Organizational Theory, 8, 221-234, 2002, Kluwer Academic Publishers

 

2001

Robert L. Axtell . “Zipf Distribution of U.S. Firm Sizes,” 2001, Science 293: 1818-1820; synopses by P. Ball appeared in the 13 September 2001 issue of Nature and by I. Peterson in the 20 October 2001 issue of Science News; reprinted in Complexity in Economics, J. Barkley Rosser, ed., Edward Elgar: Cheltenham, UK (2004)

Robert L. Axtell, Clinton J. Andrews and M.J. Small. “Agent-Based Modeling and Industrial Ecology”, 2001, Journal of Industrial Ecology, vol. 5, no. 4: 10-13

Robert L. Axtell , Joshua M. Epstein and H. Peyton Young. “The Emergence of Classes in a Multi-Agent Bargaining Model”, 2001, in S. Durlauf and H.P. Young, eds., Social Dynamics, MIT Press: Cambridge, Mass.; a synopsis by B. Bowers appeared in the 28 March 1998 issue of Science News

Leonard, C. M., Eckert, M. A., Lombardino, L. J., Given, B. K., Eden, G. F. (2001) Two anatomical phenotypes for reading disability. Cognitive Neuroscience Society Poster Session.

Nash H., Blair D., Grefenstette J. (2001). Comparing algorithms for large-scale sequence analysis. Proc. 2nd IEEE Int. Symp. on Bioinformatics and Biomedical Engineering (BIBE 2001), Rockville MD., 89-96.

R.Lin, K.Karpa, N. Kabbani, P. Goldman-Rakic, and R. Levenson.  Dopamine D2 and D3 receptors are linked to the actin cytoskeleton via interaction with Filamin A.  Proc Natl Acad Sci. 2001. 98 (9): 5258-63.

Morowitz, Harold J. Annals , New York Academy of Sciences, 929, April 2001. The Epistemological Paradox of Mind and Matter. 

Morowitz, Harold J ., R. W. Shumaker, A. M. Palkovich, B. B. Beck, and G. A. Guagnano. Journal of Comparative Psychology, 115, 2001. Spontaneous Use of Magnitude Discrimination and Ordination by the Orangutan (Pongo pygmaeus)

Lester, D.S. and Olds, J.L. (2001) Biomedical imaging: 2001 and beyond. Anat Rec. Apr15;265(2):35-6.
Olds, J.L. (2001) Are There Really Too Many Biomedical Trainees? Anat. Rec. 265:157-158
Olds, J.L. (2001) Inalienable Thoughts, Complexity 6(5):23-27.

Smith, V. “Turning off the Lights,” (with Stephen J. Rassenti and Bart Wilson) Regulation, 24(3), Fall, 2001.

Smith, V. “Theory, Experiment and the FCC Spectrum Auctions,” (with Jeffrey Banks, Mark Olson, David Porter and Stephen Rassenti), to appear, Journal of Economic Behavior and Organization, 2001.

 

2000

Robert L. Axtell . “Effects of Interaction Topology and Activation Regime in Several Multi-Agent Systems,” 2000, in Scott Moss and P. Davidsson, eds., Multi Agent Based Simulation, Lecture Notes in Artificial Intelligence, vol. 1979. Springer: N.Y.

Robert L. Axtell . “Why Agents? On the Varied Motivations for Agent Computing in the Social Sciences,” F. Liljeros, discussant, 2000, in C.M. Macal and D. Sallach, eds., Agent Simulation: Applications, Models and Tools. University of Chicago/Argonne National Laboratory: Batavia, Ill; available online at www.agent2002.anl.gov/proceedings/1999.pdf

Brown, C., Jones, K., Zeffiro, T. Given, B., Eden, G. (2000). Functional magnetic resonance imaging of phonological processing in reading-disabled children. Cognitive Neuroscience Society Poster Session.
Given, B. K. (2000). Cultural creation of intelligence. A book review of The making of intelligence by Ken Richardson. Complexity, 6(2), 59-62.
Given, Barbara K. (2000). Learning styles: A guide for teachers and parents (revised). Oceanside, CA: Learning Forum Publications
Given, B. K. (2000, November) Theaters of the mind. Education Leadership, 58(3), 72-75
Given, B. K., Knight, D., Patrick, S., & McGuire, N. (1999/2000) Personality types and learning styles of college freshman. National Forum of Applied Educational Research Journal, 13(1), pp.  23-49.
Given, B.K., Tyler, E., Hall, N., Wood, M., Johnson, W., Cabrera, E., Esterbrook, R., Free, W., Little, L., Thompson, A., & Wheeler, P. (2000 Spring). Addendum to: Tactual resources at the college level: Toys for adult learning. Pp. 43-53.

Given, B. & Yaghmour, E. (2000, Feb 18) Phonemic awareness in adolescents: A poster session. International Learning Disabilities Association Conference, Reno, NV.

Eden, G. F., Brown, C. P., Jones, K., Given, B., & Zeffiro, T. A. (2000). Phonological and visual motion processing in reading impaired children. Neuroimage, 11: S183.

Zeffiro, T., Brown, C., Jones, K., Given, B., & Eden, G. (2000). Visual motion processing in reading-disabled children. Cognitive Neuroscience Society.

L. Studer, M. Csete, S.H. Lee, N. Kabbani, J. Walikonis, B. Wold, and R. McKay.  Enhanced proliferation, survival, and dopaminergic differentiation of CNS precursors in lowered oxygen.  J Neurosci.  2000.  20 (19): 7377-83.

K.Karpa, R.Lin, N.Kabbani, and R.Levenson.  The dopamine D3 receptor interacts with itself and the truncated D3 splice variant D3nf: D3-D3nf interaction causes mislocalization of D3 receptors. Mol Pharmacol.  2000.  58 (4): 677-83.

Kaufmann, F., Kalbfleisch, M.L., Castellanos , F.X. (2000). Attention Deficit Disorders and Gifted Students: What Do We Really Know? Monograph: National Research Center on the Gifted and Talented. University of Connecticut, Storrs, CT.

Morowitz, Harold J ., Jennifer D. Kostelnik, Jeremy Yang, and George D. Cody. PNAS 97, No. 14, 7704-7708, July 5, 2000. The Origin of Intermediary Metabolism. 

Olds, J.L. (2000) Leaving the First Amendment to the Courts: A Pro-Evolution Strategy for Concerned Scientists. Anat. Rec. 261: 163-164.
Olds, J.L. (2000) Capitol Hill Update Fall 2000. Anat. Rec. 261: 168-169.

 

1999

Robert L. Axtell and Joshua Epstein. “Coordination in Transient Social Networks: An Agent-Based Model of the Timing of Retirement”, R. Hall, discussant, 1999, in H. Aaron, ed., Behavioral Dimensions of Retirement Economics, Russell Sage/Brookings Institution Press: Washington, D.C.;

Jeffrey S. Dean, George J. Gumerman, Joshua M. Epstein, Robert L. Axtell, Alan C. Swedlund, Miles T. Parker, and Steven McCarroll. “Understanding Anasazi Culture Change Through Agent-Based Modeling” (with several co-authors), 1999, in T. Kohler and G. Gumerman, eds., Dynamics in Human and Primate Societies, Oxford University Press: N.Y.;

Jeffrey S. Dean, George J. Gumerman, Joshua M. Epstein, Robert L. Axtell, Alan C. Swedlund, Miles T. Parker, and Steven McCarroll. “Understanding Anasazi Culture Change Through Agent-Based Modeling” (with several co-authors), 1999, in T. Kohler and G. Gumerman, eds., Dynamics in Human and Primate Societies, Oxford University Press: N.Y.;

Given, B.K., Tyler, E., Hall, N., Wood, M., Johnson, W., Cabrera, E., Esterbrook, R., Free, W., Little, L., Thompson, A., & Wheeler, P. (1999 Spring).  Tactual resources at the college level: Toys for adult learners. Journal of Accelerative Learning and Teaching, 24(1-2). Available at: http://TEC.camden-rutgers.edu/JALT.  Also, published by ERIC Documents

Grefenstette, J. J. (1999). Evolvability in dynamic fitness landscapes: A genetic algorithm approach. Proc. 1999 Congress on Evolutionary Computation (CEC 99), Washington, DC, IEEE Press, 2031-2038.

Moriarty, D. E., Schultz, A. C. and Grefenstette, J. J. (1999). Evolutionary algorithms for reinforcement learning. Journal of Artificial Intelligence Research, 11:199-229.

Daley, R., Schultz, A., and Grefenstette, J. (1999). Co-evolution of robot behaviors. SPIE Intl. Symposium on Intelligent Systems and Advanced Manufacturing (ISAM '99), Sept, 1999, Boston MA.

Olds, J.L. (1999) A True Champion of Basic Biomedical Research: A Conversation with Rep. John E. Porter, United States House of Representatives. Anat. Rec. 257: 191-194.
Olds, J.L. (1999) Why Anatomical Scientists Need to Practice Science Advocacy. Anat. Rec. 257:183-184.
Besharse, J.C., Carlson, B.M., Jenkins, D.P., Lester, D.S., Olds, J.L., Satir P. (1999) Redefining rats, mice, and birds. Science. Apr 2;284(5411):49-50.

 

1998

Given, B. K. (1998). Psychological and neurobiological support for learning style instruction: Why it works. Reprinted in National Forum of Teacher Education Journal, 8(2), pp. 10-15.

Given, B. K.(1997-1998). Psychological and neurobiological support for learning style instruction: Why it works.  National Forum of Applied Educational Research Journal,11(1), 12-17.

Ramsey, C. L., De Jong, K. A., Grefenstette, J. J., Wu, A.S., Durke, D.S. (1998). Genome length as an evolutionary self-adaptation. In Parallel Problem Solving from Nature-5, North Holland.

Burke, D. S., De Jong, K. A., Grefenstette, J. J., Ramsey, C. L. and Wu, A. S. (1998). Putting more genetics into genetic algorithms. Evolutionary Computation 6(4), 387-410.

Freeman, J.H., Scharenberg, A.M., Olds, J.L. and Schreurs, B.G., (1998) Classical Conditioning Increases Membrane-Bound Protein Kinase C in Rabbit Cerebellum, Neuroreport, Aug 3;9(11):2669-73.

Krichmar, J.L., Ascoli, G.A., Hunter, L. and Olds, J.L. (1998), Qualitative Reasoning as a Modeling Tool for Computational Neuroscience. In: Computational Neuroscience: Trends in Research 1998, J.M. Bower Ed. Plenum Press NY.

Olds, J.L., (1998) Reorganization of NIH's neuroscience study sections: part of a larger integration plan. Anat Rec. Apr; 253(2): 36.

Olds, J.L., (1998) R29 to RO1 transition at NIH. Anat Rec. Feb; 253(1): 5.

Olds, J.L (1998) Capitol Hill update. Anat Rec. Feb; 253(1): 3-4

Olds, J.L. (1998) Administering a National Landmark for Medicine: A Conversation With Dr. Adrianne Noe, Director of the National Museum of Health and Medicine, Washington D.C. Anat. Rec. October; 253(5):135-139.

 

1997

Given, B. K. (1997, May/June). How to deal with difficult principals: A learning styles approach. Clearing House, 70(5), 257-260.
Given, B. K. (1997). Mild learning disability or learning style difference? In L. Korinek (Ed.), Pride in the past, promise for the future. Virginia Council for Learning Disabilities Special Publication. Williamsburg, VA: College of William and Mary, pp. 57-62.
Dunn, R., Given, B., Thomson, B.K. & Brunner, C. (1997). The international learning-styles network: Where, who, when, what, where, why --and why not? National Forum of Applied Educational Research Journal,11(1), 26-29.

Grefenstette, J. J. (1997). Levels of evolution for control systems. In Genetic Algorithms in Engineering Systems, P. J. Fleming and A. M. S. Zalzala (Eds.). Peter Peregrinus Press, 1997.

Grefenstette, J. J. (1997). Efficient implementations of algorithms. In The Handbook of Evolutionary Computation, T. Baeck, D. Fogel and Z. Michalewicz (Eds.). IOP Publishing and Oxford University Press, 1997.

Grefenstette, J. J . (1997). Rank-based selection. In The Handbook of Evolutionary Computation, T. Baeck, D. Fogel and Z. Michalewicz (Eds.). IOP Publishing and Oxford University Press, 1997.

Grefenstette, J. J. (1997). Proportional selection and sampling algorithms. In The Handbook of Evolutionary Computation, T. Baeck, D. Fogel and Z. Michalewicz (Eds.). IOP Publishing and Oxford University Press, 1997.

Schultz, A. C., Grefenstette, J. J., and De Jong, K. A. (1997). Learning to break things: Adaptive testing of intelligent controllers. In The Handbook of Evolutionary Computation, T. Baeck, D. Fogel and Z. Michalewicz (Eds.). IOP Publishing and Oxford University Press, 1997.

Yamauchi, B., Schultz, A., Adams, W., Graves, K., Grefenstette, J., and Perzanowski, D. (1997). ARIEL: Autonomous robot for integrated exploration and localization. Proc. National Conf. Artificial Intelligence (AAAI-97), Providence, R.I., July 1997, 84-85.

Olds, J.L. Molecular Probes for Protein Kinase C and Related Molecules as Tools for Imaging Memory. J. Physiol. Biochem (rev. esp. fisiol.) 53:51, (1997)
G. A. Ascoli, K.X. Luu, J L. Olds, T. J. Nelson, P.A. Gusev, C. Bertucci, E. Bramanti, A. Raffaelli, P. Salvadori, and D.L., Alkon.(1997) Secondary structure and Ca2+-induced conformational change of calexcitin, a learning-associated protein.. Journal of Biological Chemistry, 272: 24771-24779.
J.L. Krichmar, G.A. Ascoli, L. Hunter and J.L. Olds,. (1997) A Model of Cerebellar Saccadic Motor Learning using Qualitative Reasoning, Lect Notes Comput Sc 1240: 133-145.
De Barry J, Kawahara S, Takamura K, Janoshazi A, Kirino Y, Olds JL, Lester DS, Alkon DL, Yoshioka T (1997) Time-resolved imaging of protein kinase C activation during sea urchin egg fertilization. Exp Cell Res 234(1):115-124
Hunter, L, Krichmar, J.L., & Olds, J.L.(1997), "Qualitative Reasoning as a Modeling Tool for Computational Neuroscience," Proceedings of the 11th International Workshop on Qualitative Reasoning. Publication #1036, Instituto di Analisi Numerica C.N.R, Pavia, Italy. pp. 265-276.
Olds, J.L. (1997) Affection for the MBL. Science.Nov 14; 278(5341): 1209.
Krichmar, J.L., Ascoli, G. , Olds, J.L. and Hunter, L. (1997) A novel and Efficient Approach for Modeling Neural Behavior I: Single Purkinje Cell Model. Technical Report published on the web at  http://www.krasnow.gmu.edu/qrn/index.html.

Maksim Tsvetovat , Maria Gini, Bamshad Mobasher, Zbigniev Wieckowski "MAGMA: An Agent-Based Virtual Market for Electronic Commerce,"International Journal of Applied Artificial Intelligence, 11:501-523,1997

 

1996

R. U. Ayres and Robert L. Axtell. “Foresight as a Survival Characteristic: When (If Ever) Does the Long View Pay?” 1996, Technological Forecasting and Social Change, vol. 51: 209-235

Robert Axtell , Robert Axelrod, Joshua M. Epstein and Michael D. Cohen. “Aligning Simulation Models: A Case Study and Results”, 1996, Computational and Mathematical Organization Theory, vol. 1, no. 2: 123-141; reprinted in R. Axelrod, 1997, The Complexity of Cooperation, Princeton University Press: Princeton, N.J.

Robert L. Axtell and Joshua M. Epstein. “Artificial Societies and Generative Social Science”, 1996, in Proceedings of the International Symposium on Artificial Life and Robotics, M. Sugisaka, editor, Oita, Japan: International Society for Artificial Life and Robotics

Given, B. K. (1995, Summer). Accelerate learning with style.  Imagine: International Alliance for Learning Newsletter, 20(2), 1,5.
Given, B. K. (1996, Winter). Accelerative learning and learning style.  Society for European Accelerative Learning Newsletter.
Given, B. K. (1996, April). Accelerate with style. Learning Beyond Frontiers (Deutsche Gesellschaft fur Suggestopadisches Journal.  Eichenstr.13, 85457 Horlkofen, Germany: Lehren & Lernen) pp 19-20.
Given, B. K. (1996). Learning styles: A synthesized model.  Journal for Accelerative Learning and Teaching. 21(1),  9-41.  Available from  http://camden-www.rutgers.edu/Camden?TEC?NEW � _TEC_web_Page/JALT.html.
Given, B. K.(1996, March). Mild learning disability or learning style difference?  ERIC Clearinghouse on Disabilities and Gifted  Education.  ED 395 431.
Given, B. K. (1996, Spring). Spreading the AL word. Imagine: International Alliance for Learning Newsletter, 3(1), 6.
Given, B. K. (1996). The potential of learning style.  In G. Reid (Ed.), Dimensions on dyslexia.  Edinburgh, Scotland: Moray House Publications, pp.  327-344.
Given, B.K., Lannen, S., Nicholson, M. & Reid, G.(1996). Learning styles: Unlocking potential.  Links 2, 2(1), 26-31.

Grefenstette, J. J. (1996). Genetic learning for adaptation in autonomous robots. In Robotics and Manufacturing: Recent Trends in Research and Applications, Vol. 6, M. Jamshidi, F. Pin and P. Dauchez (Eds.), Proc. Sixth Intl. Symposium on Robotics and Manufacturing, May 1996, ASME Press: New York, 1996, 265-270.

Schultz, A. C., Grefenstette, J. J., and Adams, W. L. (1996). RoboShepherd: Learning a complex behavior. Proc. Robots and Learning Workshop (RoboLearn '96), May 1996, Key West, Florida, 105-113.

Grefenstette, J. J. and Daley, R. P. (1996). Methods for competitive and cooperative co-evolution. In Adaptation, Co-evolution and Learning in Multiagent Systems: Papers from the 1996 AAAI Symposium, 45-50. Technical Report SS-96-01. Menlo Park, CA: AAAI Press, March 1996.

Nelson, T.J., Cavallaro, S., Yi, C., McPhie, D., Schreurs, B.G., Gusev, P.A., Favit, A., Zohar, O., Kim, J., Beuhausen, S., Ascoli, G. , Olds, J.L., Neve, R., Alkon, D.L. (1996) Calexcitin: A signalling protein that binds calcium, inhibits potassium channels, and enhances membrane excitability. Proc. Natl. Acad. Sci. USA. 93: 13808-13813.

 

1995

Robert W. Hahn and Robert L. Axtell. “Reevaluating the Relationship between Transferable Property Rights and Command-and-Control Regulation” (with R.W. Hahn), 1995, Journal of Regulatory Economics, vol. 8: 125-148

Grefenstette, J. J. (1995). Predictive models using fitness distributions of genetic operators. In Foundations of Genetic Algorithms 3, D. Whitley (Ed.), San Mateo, CA: Morgan Kaufmann.

Grefenstette, J. J. (1995). Robot learning with parallel genetic algorithms on networked computers. Proc. 1995 Summer Computer Simulation Conf. (SCSC '95). Society for Computer Simulation, Ottawa, Ontario, Canada.

Olds, J. L., Favit, A. Nelson, T.J., Ascoli, G. Gerstein, A. Cameron, M., Cameron, L., Lester, D.S., Rakow, T. and Alkon, D.L. (1995) Imaging Protein Kinase C Activation in Living Sea Urchin Eggs After Fertilization. Dev. Biol. 172: 675-682.
Olds, J. Zip-coding the Dendritic Spine: A Biolgically Plausible Solution to biological addressing within mammalian nerve cells. (1995) Proceedings International Neural Networks Society '95.
Kim C.S., Han, Y., Etcheberrigaray, R., Nelson T.J., Olds, J.L. and Alkon, D.L. Alzheimer and beta-amyloid-treated fibroblasts demonstrate a decrease in memory-associated GTP-binding protein, Cp20. (1995) Proc Natl Acad Sci U S A.  92(7): 3060-3064
Golski, S., Olds, J.L., Mishkin, M., Olton, D.and Alkon, D.L. (1995) Protein Kinase C in the Hippocampus is Altered by Spatial but not by Cued Discriminations: A Component Task Analysis. Brain Research. 676: 53-62.

 

1994

Robert L. Axtell and Joshua M. Epstein. “Agent-Based Modeling: Understanding Our Creations”, 1994, Bulletin of the Santa Fe Institute, vol. IX, number 2: 29-32. Proposed the first scale for rating agent-based computational simulations on a realism-abstraction dimension.

Given, B. K. (1994). Five habits of the agile learner. In L. Korinek & E. Nowacek (Eds.), Proceedings of the 1993 Council for Learning Disabilities Conference, Williamsburg, VA: College of William and Mary.

Given, B.K. (1994). Operation Breakthrough for continuous self-systems improvement.  Intervention, 30(1), 38-46.

Grefenstette, J. J. (1994). Evolutionary algorithms in robotics. In Robotics and Manufacturing: Recent Trends in Research, Education and Applications, v5. Proc. Fifth Intl. Symposium on Robotics and Manufacturing, ISRAM 94, M. Jamshedi and C. Nguyen (Eds.), 65-72, ASME Press: New York.

Grefenstette, J. J. (Ed.) (1994). Genetic Algorithms for Machine Learning. Kluwer Academic Publishers.

Ramsey, C. L. and Grefenstette, J. J. (1994). Case-based anytime learning. In Case-Based Reasoning: Papers from the 1994 Workshop, (D. W. Aha, Ed.). Technical Report WS-94-07, AAAI Press: Menlo Park, CA, Aug. 1994.

Olds, J. L., (1994) Invited Book Review: The Computational Brain, Churchland, P.S. and Sejnowski, T J. MIT Press, Cambridge MA. 1992; Contemp. Psychol. 39: 127-130.
Olds, J.L. and Alkon D.L. (1994) The Role of PKC in Associative Learning. Chapter. Proceedings of Protein Kinase C in the CNS: Focus on Neuronal Plasticity Milan Italy Ed:Canonico, P. Masson Milan. pp57-67.
Olds, J.L., Bhalla, U.S., McPhie, D.L., Bower, J. and Alkon D.L. (1994) Lateralization of Membrane-Associated PKC Distribution in Rat Olfactory Cortex: Specific to Learning in the Olfactory Modality. Behavioral Brain Res. 61: 37-46.
Lester, D.S., Olds, J.L., Youstra. S. and Schreurs, B. (1994) Incorporation of Fluorescent Lipid Substrates into Living Brain Slices. Neuroprotocols. 5:5-12.
Olds, J.L., Frey, K.A. and Agranoff, B.W. (1994) Sequential Double-Label Deoxyglucose Autoradiography for Determining Cerebral Metabolic Change: Origins of Variability within a Single Brain. Neuroprotocols. 5:12-24.
Lester, D.S., Olds, J.L., Scheurs, B.G., McPhie, D L., Bramham, C. R., and Alkon, D.L. (1994) Incorporation of Fluorescent Lipids into Rabbit Hippocampal and Cerebellar slices. Neuroimaging. 1: 264-275.
Lester D.S. and Olds, J.L. (1994) Invited Editorial Neuroprotocols. 5: 1.

Smith, V. “Economics in the Laboratory,” Journal of Economic Perspectives, Vol. 8, No. 1, Winter 1994, 113-131.

 

1993

Grefenstette, J. J. (Ed.) (1993). Special Track on Genetic Algorithms, IEEE Expert, IEEE Press.

Grefenstette, J. J. (1993). Deception considered harmful. In Foundations of Genetic Algorithms 2, D. Whitley (Ed.), San Mateo, CA: Morgan Kaufmann.

Cobb, H. G. and Grefenstette, J. J. (1993). Genetic algorithms for tracking changing environments. Genetic Algorithms: Proc. Fifth Intl. Conf. (ICGA93), San Mateo: Morgan Kaufmann, 523-530.

Ramsey, C. L. and Grefenstette, J. J. (1993). Case-based initialization of genetic algorithms. Genetic Algorithms: Proc. Fifth Intl. Conf. (ICGA93), San Mateo: Morgan Kaufmann, 84-91.

Craig, A.M., Olds, J.L., Schreurs, B.G., Scharenberg, A.M. and Alkon, D.L. (1993) Quantitative Distribution of Protein Kinase C a , b, g, and e mRNAs in the Hippocampus of Control and Nictitating Membrane Conditioned Rabbits. Molecular Brain Research. 19:269-276.
Olds, J.L. and Alkon, D.L. (1993) Protein Kinase C: A Nexus in the Biochemical Events that Underlie Associative Learning. Acta Neurobiologia 53: 197-207.
Mangi, H., Etcheberrigarray, R. and Olds, J. L. Lithium Decreases Membrane-Associated Protein Kinase C in Hipppocampus: Selectivity for the Alpha Isozyme (1993) J. Neurochem. 61:2303-2310.
Sanchez-Andres, J.V., Olds, J.L. and Alkon, D.L. (1993) Gated Informational Transfer within the Mammalian Hippocampus: A New Hypothesis Behavioral Brain Research, 54: 111-116.
McPhie, D.L., Matzel, L., Olds, J.L. and Alkon D.L. (1993) Learning-specific changes in the distribution of Protein Kinase C within the Type B Photoreceptor of Hermissenda crassicornis. J. Neurochem. 60:646-651.

 

1992

Grefenstette, J. J. (1992). The evolution of strategies for multi-agent environments. Adaptive Behavior 1(1), 65-90.

Grefenstette, J. J. (1992). Genetic algorithms for changing environments. Proc. Parallel Problem Solving from Nature-2, R. Maenner & B. Manderick (Eds.), North-Holland, 137-144.

Connor, J.H., Olds, J.L., Lester D.S., McPhie, D.L., Senft, S.L., Johnston, J.A. and Alkon, D.L. Heterogenous Distribution of Fluorescent Phorbol Ester Signal in Living Sea Urchin Embryos.(1992) Biological Bulletin. 183: 365-366.
Olds, J.L. and Sanchez-Andres, J.V. The Hippocampus Reconsidered: Gated Informational Transfer Allows Formation of Cognitive Maps. (1992) Proceedings International Neural Networks Society '92. Vol III:385-389.
Lo Turco, J.J., Olds, J.L., Bank, B., and Alkon, D.L. (1992) Biophysical and Biochemical Records of Associative Memory in Rabbit CA1 Pyramidal Neurons and Hermissenda B Cells, Chapter 11 pp231-251 in Correlates of Classical Conditioning, Lawrence Erlbaum Associates Pubs, Hillsdale N.J. Gormezano and Wasserman Eds.

 

1991

Grefenstette, J. J. (1991). Strategy acquisition with genetic algorithms, in Handbook of Genetic Algorithms, Davis, L. D. (Ed.), Boston: Van Nostrand Reinhold.

Grefenstette, J. J . (1991). Lamarckian learning in multi-agent environments. Proc. Fourth Intl. Conf. of Genetic Algorithms, San Mateo, CA: Morgan Kaufmann, 303-310.

Olton, D.S., Golski, S., Gorman, L.K., Olds, J.L., Alkon, D.L. and Mishkin, M. Behaviorally-Induced Changes in the Neural Activity of the Hippocampus. (1991), 16:193-220. Brain Research Reviews.
Scharenberg, A., Olds, J.L., Shreurs, B. Craig, A.M. and Alkon, D.L. Protein Kinase C Redistribution Within CA3 Stratum Oriens During Acquisition of Nictitating Membrane Conditioning in the Rabbit. Proc. Natl. Acad. Sci. USA. (1991) 88:6637-6641.
Olds, J.L. and Alkon, D.L. A Role for Protein Kinase C in Associative Learning. The New Biologist (1991) 3:27-35.

 

1990

Given, B.K., (1990, May).  Integrated strategies instruction: A new concept in teaching.  Phi Delta Kappa, George Mason University Chapter 1368 Newsletter, 1-2.

Grefenstette, J. J. (1990). Genetic algorithms and their applications. In The Encyclopedia of Computer Science and Technology, 21 (Supplement 6), A. Kent and J. G. Williams, (Eds.), New York: Marcel Dekker.

Grefenstette, J. J. , Ramsey, C. L. and Schultz, A. C. (1990). Learning sequential decision rules using simulation models and competition. Machine Learning 5(4), 355-381.

Olds, J.L. and Alkon, D.L. (1990) Imaging Memory--Molecular Approaches to tracking the engram. Bio. Chem. HS. 371: 905.
Olds, J.L., Golski, S., McPhie,D.L., Olton, D., Mishkin, M. and Alkon, D.L. Discrimination Learning Alters the Distribution of Protein Kinase C in the Hippocampus of Rats. J. Neurosci. (1990) 10:3707-3713.
Alkon, D.L., Ikeno, H., Dworkin, J., McPhie, D.L., Olds, J.L., Lederhendler, I., Matzel, L. Shreurs, B., Kuzerian, A. and Collin, C. Contraction of Neuronal Branching Volume: An Anatomic Correlate of Pavlovian Conditioning. Proc. Natl. Acad. Sci. USA (1990) 87:1611-1614.

 

1989

Alkon, D.L., Olds, J.L. and Nelson, T. The Physical Reality of Memory. Proceedings of the Takeda Symposium (1989) p. 229-240.
Olds, J.L., Anderson, M.L., McPhie, D.L., Staten, L.D. and Alkon, D.L. Imaging of Memory-Specific Changes in the Distribution of Protein Kinase C in the Hippocampus. Science. 245:866-869 (1989).

 

1988

Grefenstette, J. J. (1988). Credit assignment in rule discovery systems based on genetic algorithms. Machine Learning 3(2-3), 225-245.

Fitzpatrick, J. M. and Grefenstette, J. J. (1988). Genetic algorithms in noisy environment. Machine Learning 3(2-3), 101-120.

 

1987

Given, B.K., Stack, B. & Hickey, J. (1987).  TMJ dysfunction in children: The development of a screening instrument and parent questionnaire.  Cranio Journal of Craniomandibular Practice, 5(1), 79-86.

Grefenstette, J. J. (1987). Incorporating problem specific knowledge into genetic algorithms, in Genetic Algorithms and Simulated Annealing, Davis, L. D. (Ed.), London: Pitman.

Fitzpatrick, J. M., Pickens, D. R., Grefenstette, J. J., Price, R. R. and James, A. E. (1987). A technique for automatic motion correction in DSA. Optical Engineering 26(11), 1085-1093.

Smith, V. “Experimental Methods in Economics,” The New Palgrave: A Dictionary of Economic Theory and Doctrine, (eds. J. Eatwell, M. Milgate and P. Newman), Macmillan Press, Inc., October, 1987.

 

1986

Given, B.K. & Stack, B. (1986).  Temporo-mandibular joint dysfunction in children: A need for awareness.  Journal of School Health, 56(3), 86-89.

Grefenstette, J. J. (1986), Optimization of control parameters for genetic algorithms. IEEE Trans. Systems, Man, and Cybernetics, SMC-16(1) 122-128.

 

1985

Olds, J.L., Frey, K.A., Ehrenkaufer, R.L. and Agranoff, B.W., A Sequential Double-Label Autoradiographic Method That Quantifies Altered Rates of Regional Glucose Metabolism, Brain Res., 361:217-224 (1985).
Gorenstein, C., Bundman, M.C., Lew, P.J., Olds, J.L. and Ribak, C.E., Dendritic Transport I: Colchicine Stimulates The Transport of Lysosomal Enzymes from Cell Bodies to Dendrite, J. Neurosci., 5:2009-2017 (1985).

 

1983

Grefenstette, J. J. (1983). Stability in L systems. Theoretical Computer Science 24(1), 53-71.

Grefenstette, J. J. (1983). Network structure and the firing squad synchronization problem. Journal of Computer and System Sciences 26(1), 139-152.

Alkon, D.L., Acosta-Urquidi, J., Olds, J., and Neary, J.T., Protein Kinase Injection Reduces Voltage Dependent Potassium Currents, Science, 219:303-305(1983).

 

1982

Given, B. K.  (1982).  Learning disabilities and learning problems: The ambiguous junction between special education and regular classroom instruction.  Counterpoint, 3(2), 23.

Smith, V. “Microeconomic Systems as an Experimental Science,” American Economic Review, December, 1982.

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